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Attention:
Due to technical maintenance some tools might be unavailable. See maintenance information. 
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AltAVisT - Welcome
Alternative Alignment Visualization Tool - Version 1.0AltAVist (Alternative Alignment Visualization Tool) is a WWW-based software program that is able to compare two alternative multiple alignments of a given sequence set to each other. Regions where both alignments coincide are color-coded to visualize the local agreement between the two alignments and to identify those regions of the alignments that can be considered to be most reliable.
An online description of AltAVisT is available here.
Two input options are available:
-
OPTION
1: Enter a multiple sequence set.
The program will run DIALIGN and CLUSTAL W on these sequences and will compare the two resulting alignments to each other.
- OPTION
2: Enter two different pre-calculated alignments of a
multiple sequence set.
The program will compare the two alternative alignments to each other
Public Research assisted by AltAVisT should cite:
B. Morgenstern, S. Goel, A. Sczyrba, A. Dress
AltAVisT : A WWW tool for comparison of alternative multiple alignments
Bioinformatics, 19:425-426, 2003.
B. Morgenstern, S. Goel, A. Sczyrba, A. Dress
AltAVisT : A WWW tool for comparison of alternative multiple alignments
Bioinformatics, 19:425-426, 2003.
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