Divide-and-Conquer Multiple Sequence Alignment PAM 250

# protein score matrix: 20 entries
# gapscore=8, terminal gapscore=0
# min=0, max=25

-    0
C   12   5
S   12  17  15
T   12  19  16  14
P   12  20  16  17  11
--------------------------
A   12  19  16  16  16  15
G   12  20  16  17  18  16  12
N   12  21  16  17  18  17  17  15
D   12  22  17  17  18  17  16  15  13
E   12  22  17  17  18  17  17  16  14  13
----------------------------------------------
Q   12  22  18  18  17  17  18  16  15  15  13
H   12  20  18  18  17  18  19  15  16  16  14  11
R   12  21  17  18  17  19  20  17  18  18  16  15  11
K   12  22  17  17  18  18  19  16  17  17  16  17  14  12
M   12  22  19  18  19  18  20  19  20  19  18  19  17  17  11
------------------------------------------------------------------
I   12  19  18  17  19  18  20  19  19  19  19  19  19  19  15  12
L   12  23  20  19  20  19  21  20  21  20  19  19  20  20  13  15  11
V   12  19  18  17  18  17  18  19  19  19  19  19  19  19  15  13  15  13
F   12  21  20  20  22  21  22  21  23  22  22  19  21  22  17  16  15  18   8
Y   12  17  20  20  22  20  22  19  21  21  21  17  21  21  19  18  18  19  10   7
--------------------------------------------------------------------------------------
W   12  25  19  22  23  23  24  21  24  24  22  20  15  20  21  22  19  23  17  17   0
     -   C   S   T   P   A   G   N   D   E   Q   H   R   K   M   I   L   V   F   Y   W