| Day 1, 4th October 1999 | |
| 900-1300 | Workshop, Tutorials |
| 900 | Tutorial: The Biology and
Bioinformatics of Regulatory Regions in Genomes Thomas Werner, Institute of Mammalian Genetics, GSF-National Research Center for Environment and Health, Munich |
| 1400-1430 | Opening |
| 1430-1615 | Molecular and Genome Evolution |
| 1430 | Keynote: What can bioinformatics contribute to explain the
origin of life? David Penny, Massey University |
| 1515 | A new Method for Modeling Protein Evolution Tobias Müller, Rainer Spang, Martin Vingron, DKFZ Heidelberg |
| 1545 | Topology in Phenotype Space Jan Cupal, Peter Schuster, Peter F. Stadler, Institut für theoretische Chemie, Universität Wien |
| 1615-1645 | Coffee break |
| 1645-1900 | Sequence/Structure/ Function Relations -1 |
| 1645 | Keynote: An Information Theoretic Analysis of Correlation Among
Amino Acid Sites in bHLH Protein Domains Bill Atchley, North Carolina State University |
| 1730 | Combining Divide-and-Conquer, the A*-Algorithm, and Successive
Realignment Approaches to Speed up Multiple Sequence
Alignment Knut Reinert, Celera Genomics;Jens Stoye, DKFZ Heidelberg; Torsten Will, FSPM Universität Bielefeld |
| 1800 | Predicting Transcription Factor Binding Sites by Constructing
Context Specific Matrices Niels Grabe, Ralf Hofestädt, ITI Universität Magdeburg |
| 1830 | Engineering Support Vector Machine Kernels that Recognize
Translation Initiation Sites in DNA Alexander Zien, G. Rätsch, S. Mika, B. Schölkopf, C. Lemmen, A. Smola, T. Lengauer, K.-R. Müller, GMD |
| 1900 | Dinner |
| 2000 | Greetings / Welcoming messages |
| 2030 | Genome Analysis |
| Keynote: A Whole Genome Assembler for Drosophila Gene Myers, Celera Genomics |
|
| The Whole Genome Song - The Succulents | |
| | |
| Day 2, 5th October 1999 | |
| 900 | Announcements |
| 915 | Genome Sequence Assembly Using Trace Signals and Additional
Sequence Information Bastien Chevreux, S. Suhai, DKFZ Heidelberg; T. Wetter, Universität Heidelberg |
| 945-1230 | Sequence/Structure/ Function Relations -2 |
| 945 | Keynote: Methods for Predicting Target Sites of Transcriptions
Factors Akinori Sarai, RIKEN Institute |
| 1030 | SESAM: Seed Extraction Sequence Analysis Method Normann Strack, H. Werner Mewes, Munich Information Center for Protein Sequences |
| 1100-1130 | Coffee break |
| 1130 | Phylogeny Meets Sequence Search Marc Rehmsmeier, Martin Vingron, DKFZ Heidelberg |
| 1200 | Conserved Secondary Structures in HBV Pregenomic RNA Roman Stocsits, Ivo L. Hofacker, Peter F. Stadler, Institut für theoretische Chemie, Universität Wien |
| 1230-1330 | Lunch |
| 1330-1600 | Poster Session |
| DECHEMA-Ausschuß "Bioinformatik" (1300-1430) | |
| FG der GI (1430-1600) | |
| 1600-1815 | Protein and Drug Design |
| 1600 | Keynote: Functional Genomics - An Integrated Approach to the
Biosciences Dietmar Schomburg, University of Cologne |
| 1645 | Rapid Software Prototyping in Computational Molecular
Biology Oliver Kohlbacher, Hans-Peter Lenhof, Max-Planck Institut für Informatik |
| 1715 | Algorithmic Approach to Quantifying the Hydrophobic Force
Contribution in Protein Folding Rolf Backofen, S. Will, P. Clote, Institut für Informatik, Universität München |
| 1745 | An Efficient Potential for Protein Sequence Design G. Weberndorfer, I.L. Hofacker, P.F. Stadler, Institut für theoretische Chemie, Universität Wien |
| 1900 | Departure for Conference Dinner |
| 1930 | Conference Dinner at Wuelfeler
Brauereigaststätten (with local specialties of Lower Saxony) |
| | |
| Day 3, 6th October 1999 | |
| 900 | Announcements |
| 915-1115 | Metabolic and Regulatory Networks |
| 915 | Quantitative Approach to the Analysis of Complex Hormonal
Signaling Klaus Prank, Georg Brabant, Department of Clinical Endocrinology, Medical School Hannover |
| 945 | Nonlinear Numerical Optimzation Technique Based on Genetic
Algorithm for Inverse Problem: Towards the Inference of Genetic
Networks Daisuke Tominaga, Masahiro Okamoto, Kyushu Institute of Technology; Yukihiro Maki, Shoji Watanabe, Yukihiro Eguchi, Research Institute, Mitsui Knowledge Industry Co., Ltd |
| 1015 | Pathway Analysis in Metabolic Databases via Differential Metabolic
Display (DMD) Robert Küffner, Ralf Zimmer, Thomas Lengauer, GMD |
| 1045 | E2F Composite Units in Promoters of Cell Cycle Genes Alexander Kel, Olga Kel-Margoulis, Institute of Cytology and Genetics, Novosibirsk; Edgar Wingender, GBF Braunschweig |
| 1115-1145 | Coffee break |
| 1145-1400 | Intelligent Biological Databases |
| 1145 | Keynote: Integration of Biomedical Information Jaime Prilusky, Weizmann Institute of Science |
| 1230 | Ontological Design Patterns for the Integration of Molecular
Biological Information Jacqueline Renée Reich, Department of Computer Science, University of Manchester |
| 1300 | HOBACGEN: A Database of Homologous Genes in Bacteria Guy Perrière, Laurent Duret, Laboratoire de Biométrie et Biologie Evolutive, Université Claude Bernard |
| 1330 | A Database Framework for Mapping Expression
Patterns X. Chen, Peking University; A. Dress, Universität Bielefeld; H. Karas, BIOBASE GmbH; I. Reuter, E. Wingender, GBF Braunschweig |
The Conference ends at 14.00 |
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