Gecko2 - Manual Section

Download the Gecko2-Manual (10K) for an easy start with Gecko2. The manual contains a detailed description of all features of Gecko2. It also contains information about the structure and content of the input files used for the gene cluster detection. If one uses Gecko2 for the first time, it is highly recommended to download the example data files to get a first idea about the functionality of Gecko2.

Downloads:

Example data files

ghostFamOutStandard.cog (660K): This file is an input sequence file for Gecko containing 5 genomes. The classification of the genes to their families of homologs was done with GhostFam using the standard parameters.

cog_data.zip (1.2 MB): The file in this archive contains an input sequence file for Gecko with 43 genomes. The classification of the genes to their families of homologs is taken from the COG database.