Oma results 1amk

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Information

Number of sequences5
Longest sequence254
Average identity49
  
best oma cost36659
at segment width128
time[s]19
mem[pages]1155
mem[MB](8kb/page)9

Alignment

# SAKPQPIAAANWKCNGTTASIEKLVQVFNEH-TISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAENA-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPEFRDIIDATR----- #
# A--RTFFVGGNFKLNGSKQSIKEIVERLNTA-SIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVK--DWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN----- #
# APSRKFFVGGNWKMNGRKQSLGELIGTLNAA-KVPADTEVVCAPPTAYIDFARQKL-DPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVK--DWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ----- #
# S-KPQPIAAANWKCNGSQQSLSELIDLFNST-SINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--------GNADALASLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ----- #
# M--RHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIA-KVDANIAEQVIIQYGGSVNASNAAELFAQHDVDGFLVGGASLKPEFVDIINAAEAAKQA #

Iteration

LeveldcaL#cutstime [s]U BoundU /wo cg costcost2
129 4.5723691736781 
64126 3.9643686636706 3670636706
5862 2.0533678636706 3668036680
41630 1.1743671236680 3665936659
33214 0.8093665936659 3665936659
2646 0.8323665936659 3665936659
11282 1.3883665936659 3665936659

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.