Oma results 1bbt3

back to summary.

Information

Number of sequences	5
Longest sequence	192
Average identity	13

best oma cost	30730
at segment width	128
time[s]	2263
mem[pages]	35447
mem[MB](8kb/page)	277

Alignment

# FTNLLDVAEACPTFLRFEGG--------VPYVTTKTDSDRVLAQF--DMSLAAKHMSNTFLAGLAQYYTQYSGTINLHFMFTGPTDAKARYMVA--YAPPGMEPPKTPE----AAAHCIHAEWDTGLNSKFTFSIPYLSAAD--YTYT--ASDVAETTNVQ---------GWVCLFQITHGKADGDALV--VLASAGKDFELRLPVDARA-E #
# VKNLIEMCQV-DTLIPINSTQSNIGNVSMYTVTLSPQTKLAEEIFAIKVDIASHPLATTLIGEIASYFTHWTGSLRFSFMFCGTANTTLKVLLA--YTPPGIGKPRSRK----EAMLGTHVVWDVGLQSTVSLVVPWISASQ--YRFTTPDTYSSAGYITC---------WYQTNFVVPPNTPNTAEML--CFVSGCKDFCLRMARDTDLHK #
# GLET-RVVQA-ERFFK------------THLFDWVTSDSFGRCHL---LELPTDHKGVYGSLTDSYAYMR--NGWDVEVTAVGNQFNGGCLLVA--MVPELCSIQKREL-Y--QLTLFPHQFINPRTNMTAHITVPFVGVNR--Y-----DQYKVHKPWTL---------VVMVVAPLTVNTEGAPQIK--VYANI-APTNVHVAGEFPSKE #
# EMSV-------ESFLGRSGC--------IHESVLDIVDNYNDQSF-TKWNINLQEMAQIRRKFEMFTYARFDSEITMVPSVAAKDGHIGHIVMQYMYVPPGAPIPTTRDDYAWQSGTNASVFWQHGQPFP-RFSLPFLSIASAYYMFY--DGYDGDTYKSRYGTVVTNDMGTLCSRIVTSEQLHKVKVVTRIYHKA-KHTKAWCPRPPRAVQ #
# QHTD-------VSFIM------------DRFVKVTPQNQINILDL---MQVPSHTLVGGLLRASTYYF----SDLEIAVKHEGD--------LT--WVPNGA--PEKAL----DNTTNPTAYHKAPLT---RLALPYTAPHR---VLA--TVYNGECXXXR---------TLPTSFNYGAIKATRVTEL--LYRM--KRAETYCPRPLLAIH #

Iteration

Level	dcaL	#cuts	time [s]	U Bound	U /wo cg	cost	cost2
7	2	128	3.950	32113	31433	31163	31163
6	4	126	3.878	31859	31163	31163	31163
5	8	62	2.051	31331	31163	31050	31050
4	16	30	1.123	31154	31050	30991	30872
3	32	14	0.889	30872	30872	30864	30839
2	64	6	8.243	30839	30839	30808	30808
1	128	2	2238.136	30808	30808	30730	30730

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.