Oma results kinase

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Information

Number of sequences	5
Longest sequence	276
Average identity	20

best oma cost	46064
at segment width	128
time[s]	121
mem[pages]	3800
mem[MB](8kb/page)	30

Alignment

# NYIFGRTLGAGSFGVVRQARKLSTNEDVAIKILLKKALQGNNVQLQMLYEELSILQ--KLSH-PNIVSFKDWFESKDKFY----IVTQLATGGELFDRILSRGKFTE-----VD-AVEIIV----QILGAVEYMHSKNV---VHRDLKPENVLYVDKSENSP--LV-IADFGIAKQLK--GEEDLIYKAA-----GSLGYVAPEVLTQDGHGK-------PCDIWSIGVITYTLLCG---YSPFIAESVEGFMEECTASRYPVTFHMPYWDNISID-VKRF---ILK--ALRLNPADRPTATELLDDPWITSK #
# DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLV--NGDR-RWITQLHFAFQDENYLY----LVMEYYVGGDLLTLLSKFGERIP-----AE-MARFYLA---EIVMAIDSVHRLGY---VHRDIKPDNIL-LDRCGHIR-----LADFGSCLKLRADGTVRSLVAV------GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG---QTPFYADSTAETYGKIVHYKEHLSLPLVD-EGVPEE-ARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWD #
# TRKFKVELGRGESGTVYKGV-LEDDRHVAVKKLEN-----VRQGKEVFQAELSVIG--RINH-MNLVRIWGFCSEGSHRL----LVSEYVENGSLANILFSEGGNIL-----LDWEGRFNIAL--GVAKGLAYLHHECLEWVIHCDVKPENIL-LDQAFEPK-----ITDFGLVKLLNRGGSTQNVSHVR-----GTLGYIAPEWVSSLPITA-------KVDVYSYGVVLLELLTGT--RVSELVGGTDEVHSM--LRKLVRMLSAKL-EGEEQSWIDGY---L----DSKLNRPVNYVQARTLIKLAVSCL #
# QIRLTGRVGSGRFGNVSRGD--YRGEAVAVKVFNA-------LDEPAFHKETEIFETRMLRH-PNVLRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFLLENTVNIETYYNLMR-STASGLAFLHNQIGGSKESNKPAM---AHRDIKSKNIM-VKNDLTCA-----IGDLGLSLSKPEDAASDIIANENYKC--GTVRYLAPEILNSTMQFT-------VFESYQCADVYSFSLVM---WETLCRCEDGDVLPR--EAATVIPYIEWT-DRDPQD-AQMF--DVVC--TRRLRPTENPLWKDHPEMKHIMEI #
# HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-FEP-----RRSDAPQLRDEYRTYK--LLAGCTGIPNVYYFGQEGLHNV----LVIDLL-GPSLEDLLDLCGRKFS-----VK-TVAMAAK---QMLARVQSIHEKSL---VYRDIKPDNFL-IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSR-------RDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC-AGFPEE-FYKY---MHY--ARNLAFDATPDY-DYLQGLFSKVL #

Iteration

Level	dcaL	#cuts	time [s]	U Bound	U /wo cg	cost	cost2
8	2	179	5.238	47632	46888	46537	46537
7	4	178	4.678	47313	46537	46484	46484
6	8	126	3.456	46964	46484	46440	46440
5	16	62	1.840	46616	46440	46422	46205
4	32	30	1.105	46301	46205	46205	46205
3	64	14	1.528	46269	46205	46205	46205
2	128	6	95.089	46205	46205	46064	46064

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.