Oma results 1adj
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Information
| Number of sequences | 4 |
| Longest sequence | 418 |
| Average identity | 35 |
| | |
| best oma cost | 38051 |
| at segment width | 128 |
| time[s] | 23 |
| mem[pages] | 1319 |
| mem[MB](8kb/page) | 10 |
Alignment
# SFSGPKGIPDYFPPDSAQFVAVRDGLLTAARRRGYGDIELPVFEDTALFARGVGESTDVVAKEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGL--DRGALPVKLCYAGPFFRYERPQAGRCRQLQQVGVEAIGVDDPALDAEVITIADAGFRSLGLDGFQLEITSLGDGTCRPQYRKLLQEFLLQL--DLDEDTRRRAELNPLRVLDDKRPQVQAMTAAAPVLLDHLSDGAKQHFDTVLAHLDALRVPYVINPRMVRGLDYYTKTTFEFVHPGLGAQSGIGGGGRYDGLMRQLGGQDLSGIGFGLGVDRTLLALHAEGKT-VGETTRCDVFGVSLGEAAKLKVAMLAGQLRAAGVRVDLIYGDRGIRGAMRAAGRSGARIALIVDDCAIKADGVGVRDLATGEQISVAVDSVVAEVISRI #
# Q--AIRGTKDILPDEQLYWQFIHEKVASLLKYANYKEIKTPIFENSDLYDRGIGENTDIVNKEMYRFNDRSNRDITLRPEGTAGVVRAFIENRM--DVQNRLQKLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSSDARADAEIIHLAMNIFNDLSVNDLQLDINSIGKAEDRNHYQAKLQEYLEQYYDDLDTDSQNRLSSNPIRILDTKNKYTQTILNDSPRISDFLSLESEKHFDDVCDYLTLLNVPYKINTQLVRGLDYYNDTAFEIKILKSQGQDTLCGGGRYDSLIHQLGGNKTPAVGCAIGLERLLL-VAKDNI--LLPHMSIDCYIVSKGIKARKIGIIITQFLRNQLVKTELDISSSNFGKQLKQAHKKRAIACLILGDNEIQQETITIKWMYTQEQENMSIIE----FKNKI #
# Q--KPKGTQDILSVAAAKWQYVEGVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDIVTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQAGRLREFHQIGVECFGSANPATDVETIAMAYHLFERLGIKGVTLHLNSLGNAASRAAYRQALIDYLSPMRDTLSKDSQRRLDENPLRVLDSKEKEDKIAVANAPSILDYQDEESQAHFDAVRSMLEALAIPYVIDTNMVRGLDYYNHTIFEFITEVDQSELTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLILDKQGVE-LPVEEGLDVYIAVLGADANVAALALTQAIRRQGFTVERDYLGRKIKAQFKSADTFKAKVVITLGESEIKAGQAVLKHNQTRQEMTVSFDQIQTDFASIF #
# Q--KPRGVKDWFGDELVYFNWIVKKIRSLAFNWGFSEVKTPLFENAQLFQRS-NANADIVQKELYQFFDKSQRELALRPEATTPIVRLACENKLM-QEANFPLKLFCIGSMYRYERPQNNRFREHWQFSCEVFGFSNLFIFLDTLLFANSLLEALGITGYVLKINNLANFETLSKWNKALKDYLTPYKLELTELSQKRLEKNPLRILDDKIDQKKSFVKNAPKITDFLDASAKQDSELLKTQLKKHNISFEWTDNLVRGLDYYTGFVFEYV----KNQDTILAGGVYDNLVEELSSNPTPALGFACGIERLINCLEIDKKAFILNTKPKQMLVICLFEEA-LEELVWLAKLWREYNQVTIYPKVIKVDNGIRLANRLGYTFIGIVGKTDFDKKAITIKNLVSKQQTIYTWNE--------L #
Iteration
| Level | dcaL | #cuts | time [s] | U Bound | U /wo cg | | cost | cost2 |
| 7 | 2 | 254 | 7.976 | 38475 | 38291 | | 38104 | 38104 |
| 6 | 4 | 126 | 3.917 | 38192 | 38104 | | 38051 | 38051 |
| 5 | 8 | 62 | 2.118 | 38075 | 38051 | | 38051 | 38051 |
| 4 | 16 | 30 | 1.368 | 38075 | 38051 | | 38051 | 38051 |
| 3 | 32 | 14 | 1.230 | 38075 | 38051 | | 38051 | 38051 |
| 2 | 64 | 6 | 1.123 | 38075 | 38051 | | 38051 | 38051 |
| 1 | 128 | 2 | 2.036 | 38051 | 38051 | | 38051 | 38051 |
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Picture of Iteration
Explanation of the key.
Picture of Watches
Explanation of the key.
