Oma results 1eft
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Information
| Number of sequences | 4 |
| Longest sequence | 405 |
| Average identity | 30 |
| | |
| best oma cost | 36622 |
| at segment width | 128 |
| time[s] | 42 |
| mem[pages] | 1739 |
| mem[MB](8kb/page) | 14 |
Alignment
# AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDI-DKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGV-EMHRKTLQEGIAGDNVGLLLRGVSREEVERGQ-VLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE #
# -----MSQKPHLNLIVIGHVDHGKSTLIGRLL-MEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEEGQTREHIILSKTMGINQVIVAINKMDLADDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVA---PDGDNVTHKSTKM--PWYNGP-TLEELLDQ-LEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVGKIGE---VRSI-ETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGD-VAGSVQNPTVADEFTAQVIVIWHPTAVGV-GYTPVLHVH----TASIACRVSAEKNPQFIKAGDSAIVKFKPIKELVAEKFRRFAMRDMGKTVGVGVIIDV-- #
# ---DMFGGKDHMSIIFMGHVDAGKSTMGGNLLFLTGAEKYEREAKDAGIM-DTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEGGQSREHAILAKTQGVNKLVVVINKMDDPTSKERYEECTTKLAMYLKGVGYQKGDVLFMPVSG---YTGAGLKERVSQKDAPWYNGP-SLLEYLDS-MPLAVRKINDPFMLPISS--KMKDLGTVIEGKIESGHVKKGQNLLVMPNKTQVE---VTTIYNETEAEADSAFCGEQVRLRLRGIEEEDLSAGY-VLSSINHVKTVTRFEAQIAIVELKSILST-GFSCVMHVHTAIEEVTFTQLLHSKKAPAFAKQGMKIIAVLETTEPVCIESLGRFTLRDQGQTIAIGKVTKLL- #
# -------------IATAGHVDHGKTTLLQA---ITGVNA------------DRLPEEKKRGMTIDLGYAYWPQPGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA-RVDEVERQVKEVLREYGFAEAKL-FITAAT----EGRGMD---------------ALREHLLQ-LPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMR---VRAL-HAQNQPTETANAGQRIALNIAGDAKEQINRGDWLLADV----PPEPFTRVIVELQTHTPLTQ---WQPLHIHHA--ASHVTGRVS-------LLEDNLAELVFDT--PLWLADNDRLVLRDISARNTLAGARVV-- #
Iteration
| Level | dcaL | #cuts | time [s] | U Bound | U /wo cg | | cost | cost2 |
| 7 | 2 | 254 | 7.358 | 37330 | 36962 | | 36732 | 36732 |
| 6 | 4 | 126 | 3.802 | 36996 | 36732 | | 36697 | 36697 |
| 5 | 8 | 62 | 2.072 | 36881 | 36697 | | 36679 | 36679 |
| 4 | 16 | 30 | 1.198 | 36767 | 36679 | | 36656 | 36652 |
| 3 | 32 | 14 | 3.027 | 36692 | 36652 | | 36641 | 36641 |
| 2 | 64 | 6 | 2.637 | 36641 | 36641 | | 36632 | 36632 |
| 1 | 128 | 2 | 18.826 | 36632 | 36632 | | 36622 | 36622 |
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Picture of Iteration
Explanation of the key.
Picture of Watches
Explanation of the key.
