Oma results 1sesA

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Information

Number of sequences	5
Longest sequence	442
Average identity	33

best oma cost	67150
at segment width	128
time[s]	57
mem[pages]	1876
mem[MB](8kb/page)	15

Alignment

# MVDLKRLRQE----PEVFHRAIREKG-VALDLEALLALDREVQELKKRLQEVQTERNQVAKRV--PK--APPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVG-GEEANREIKRVGGPPEFSF-----------PPLDHVALMEKNGWWE-PRISQVSGSRSYALKGDLALYELALLRFAMDFMARR-GFLPMTLPSYAREKAFLGTGHFPATRDQVWA---IAETDLY------LTGTAEVVLNALHSGEIL--PYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEG---------RYRETHSCSALLDWQARRANLRY--R-DPEGRVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVLEPC #
# MLDPNKLRNN----YDFFKKKLLERNNVEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQV------AKQKDNKKLLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGKNSEANLELLKEGRKPVFDF-----------KPLPHRELCEKLNLVFADKATKISGTRFVAYTDKAAKLLRAITNLMIDLNKSK--YQEWNLPVVINELSLRSTGQLPKFKDDVFK---LENTRYY------LSPTLEVQLINLHANEIF--NEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTELVKFCKP--ENAINELEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASN---------EYREVSSCSSCGDFQARRAMIRY--KDNINGKNSYVATLNGTALSIDRIFAAILENFQTKDGKILIPQALKKYLDFDTIK-- #
# MLDINQFIEDKGGNPELIQSRQKARNASVEIVDEIISDYKDWVTRFKELDELNKKFNKLQKDIGLKK--NFKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVS-NDEENNELVRTWKPEDLEAVPIASVTGKPASLGSHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAK-GYIPLQAPVMMNKELMSKTAQLSEFDEELYK-IDVGEDEKY------LIATSEQPISAYHSGEWFKPEQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQK---------EYKELVSCSNCTDYQSRNLEIRCGIKMGKDREKKYVHCLNSTLAATQRALCCILENYQTEDG-LVVPEVLRKYIPGE----- #
# MLSRQFVREH----PETVRDAIERKGVTGVDLDEILDIDEEWRELKAEGDGLRQERNEVSSKIGELKQDGKDEEAQEAIDRSQELKDELQDIEERADELESQLEEALLELPNIPHESVPTGEGEADNVERYREGFDDLRDL---------PDEVVPHYDLGEDLDLLDFERGAKVSGGGYQFVKGEGARLEHALIQFMLDVHREQ-EYVDVLPPIPVNSDSMEGTGQLPKFAEDAYR-VGARQDDDYDSDDLWLLPTAEVPVTNMYRGEIL--LDDDLPVKHQAFSPNFRREAGEHGTETRGYVRVHQFHKVELVNFVRP--ENSYDRLESLLDEAAEVLDRLELPYRVLDMCTGDMGFTQAKKYDIEVWAPGDDMEDGPDRGGRWLEVSSVSNFEDFQARRAGLRY--RPERHESADYLHTLNGSGLAVPRVLVAIMEYYQNDDGTITVPEPLRPYMGGQEV--- #
# MIDPNLLRNN----LAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAK--ARGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPRTFDF-----------EVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYA-----LIPTAEVPVTNLVRDVII--DEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDP--DKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQN---------TYREISSCSNMWDFQARRMQARC--KAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMG------- #

Iteration

Level	dcaL	#cuts	time [s]	U Bound	U /wo cg	cost	cost2
7	2	254	7.634	67867	67403	67305	67305
6	4	126	4.096	67433	67305	67294	67294
5	8	62	2.297	67358	67294	67231	67231
4	16	30	1.579	67263	67231	67172	67154
3	32	14	1.555	67218	67154	67153	67153
2	64	6	3.466	67153	67153	67153	67153
1	128	2	30.665	67153	67153	67150	67150

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.