Oma results 4enl

back to summary.

Information

Number of sequences	3
Longest sequence	421
Average identity	20

best oma cost	18936
at segment width	128
time[s]	26
mem[pages]	1292
mem[MB](8kb/page)	10

Alignment

# AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVSDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEEL--GD #
# AL----------IERIDAIIVDLPTIRPHKLAMHTMQQQTLVVLRVRCSDGV----EGIGEATTIGGLA------YGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLDKLAKGNTFAKSGIESAL---LDAQGK------RLGLPVSELLGGRVRDSLEVAW-TL-----------ASGDTARDIAEARHMLEIRRHRVFKLKIG--------ANPVEQDLKHVVTIKRELGDSASVRVDVN----QYWDESQAIRACQVLGDNGIDLIEQPISRINRGGQVRLNQRTPAPIM-ADESIESVEDAFSLAADG---------------------AASIFALKIAKNGGPRAVLRTAQIAEAAGIG-LYGGTMLEGSIGTLASAHAFLTLRQLTWGTEL-------FGPLLLTEEIVNEPP #
# EVL---------ITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGV----VGHSYLFAYTPVA-------LKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAA---WDALGK------VHETPLVKLLGANARPVQAYDSHSL-----------DGVKLATERAVTAAELG---FRAVKTKIG--------YPALDQDLAVVRSIRQAVGDDFGIMVDYN----QSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQ-MGENWLGPEEMFKALSIG---------------------ACRLAMPDAMKIGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLAATPTAHWLERLDLAGSV-------IEPTLTFE-----GG #

Iteration

Level	dcaL	#cuts	time [s]	U Bound	U /wo cg	cost	cost2
7	2	254	7.417	19635	19411	19184	19184
6	4	126	3.795	19280	19184	19149	19149
5	8	62	1.919	19189	19149	19131	19131
4	16	30	1.115	19171	19131	19061	18993
3	32	14	0.681	18993	18993	18976	18976
2	64	6	1.105	18976	18976	18965	18965
1	128	2	7.346	18965	18965	18936	18936

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.