Oma results of: glg

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Information

Number of sequences5
Longest sequence486
Average identity31
  
best oma cost74383
at segment width
time[s]?
mem[pages]0
mem[MB](8kb/page)0

oma version info: (1.0-solaris-gnu=egcs-2.91.66-opt-watch-990614:1115)

Alignment

    : M--SLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDGEI--------LYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKET--PRYDNRYRDFKGTP-----PKGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNE------LDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNF-----KIPNFFHVPMILNE-EGQKLSKRHGATN--VMDYQEMGYLKEALVNFLARLGWSYQ------DKEVFSMQELLELFDPKDLNSSPSCFSWHKLNWLNAHYL--KNQSVQELLKLLKPFSFSDLSH--LNPTQLDRLLDALKERSQTLKELALKIDEV--LIAPVEYE-E-KVFKKLNQALVMPLLEKFKLELNKANF-NDESALENAMR-QIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEAL-FILGKTESVKRIE :
    : M--EKIRTRYAPSPTGYLHVGGTRTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQFDNLRWLGVIADESVYNPGNYGPYLQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRKQAINNHKT--PKYLGHCRNLHSKKITNHLEKNDPFTIRLKINNEAEYSWNDLVRGQITIPGSA------LTDIVILKANGVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAIYQALGF----KRIPRFGHLSVIVDE-SGKKLSKRDEKTTQFIEQFKQQGYLPEALLNFLALLGWHPQ-----YNQEFFNLKQLIENFSLSRVVSAPAFFDIKKLQWINANYI--KQLTDNAYFNFIDNYLDVKVDY--LKDKNREISL-LFKNQITHGVQINELIRES--FATKIGVE-NLAKKSHILFKNIKLFLEQLAKSLQGLEE-WKAEQIKTTIN-KVGAVFNLKGKQLFMPIRLIFTNKEHGPDLAHII-EIFDKESAINLIK :
    : HPSLPVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETP--------IKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSKLAQGIPFTVRFKSPERYP-TFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGW-----ACPKFIHIPLLTTV-GDKKLSKRKGDMS--ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRINDFHDEFYYFFEKPKYN-DNDAVTKFLSKNESRHIAHLLKKLGQLQEGTDAQEVESMVE-TMYYENGFSRKVTYQAMRFALAGCHPGAKIAAMI-DILGIKESNKRLS :
    : PQAAKVRVRFCPSPTGVPHVGMVRTALFNWAYARHTGGTFVLRIEDTDADRDSEESYLALLDALRWLGLNWDEGPEVGGPYGPYRQSQRTDIYREVVAKLLATGEAYYAFSTPEEVEN-RHLAAGRNPK--LGYDNFDRDLTDAQFSAYLAEGRKPVVRLRMPDEDI-SWDDLVRGTTTFAVGT------VPDYVLTRASGDPLYTLVNPCDDALMKITHVLRGEDLLSSTPRQVALYQALIRIGMAERIPEFGHFPSVLGE-GTKKLSKREPQSN--LFAHRDRGFIPEGLLNYLALLGWAIA-----DDHDLFSLDEMVAAFDVVDVNSNPARFDQKKADAVNAEHI--RMLDSEDFAGRLRDYFTTHGYHIALDPANYEAGFVAAAQLVQTRIVVLGDAWDLLKFLNDDEYSIDSKAAAKELDADAGPVLDVACAVLDSLVD-WTTASIEDVLKVALIEGLGLKPRKVFGPIRVAATGALVSPPLFESL-ELLGRARSLQRLS :
    : M------LRFAPSPTGDMHIGNLRAAIFNYIVAKQQYKPFLIRIEDTDKERNIEGKDQEILEILKLMGISWDKLV--------Y-QSHNIDYHREMAEKLLKENKAFYCYASAEFLEREKEKAKNEKRP--FRYSDEWATLEK-------DKHHAPVVRLKAPNHAV-SFNDAIKKEVKFEPDE------LDSFVLLRQDKSPTYNFACACDDLLYKISLIIRGEDHVSNTPKQILIQQALGS----NDPIVYAHLPIILDEVSGKKMSKRDEASS--VKWLLNQGFLPVAIANYLITIGNKVP-------KEVFSLDEAIEWFSLENLSSSPAHFNLKYLKHLNHEHL--KLLDDDKLLELTS-----------IKDKNLLGLLRLFIEECGTLLELREKI-SL--FLEPKDIV---KTYENEDFKE--RCLALF-NALTSMDF-QAYKDFESFKK-EAMRLSQLKGKDFFKPLRILLTGNSHGVELPLIFPYIQSHHQEVLRLK :

Iteration

LeveldcaL#cutstime [s]U BoundU /wo cg costcost2
82262 7.7927572975201 7464074640
74254 6.5567527274640 7464074640
68126 3.4147491274640 7456674566
51662 2.0567475074566 7444274419
43230 1.5307445974419 7441974419
36414 3.8047441974419 7439774397
21286 193.7967439774397 7439774397
12562 1550.6887439774397 7438374383

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.