Oma results of: 1ajsA

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Information

Number of sequences4
Longest sequence387
Average identity15
  
best oma cost38473
at segment width
time[s]?
mem[pages]0
mem[MB](8kb/page)0

oma version info: (1.0-solaris-gnu=egcs-2.91.66-opt-watch-990610:2033)

Alignment

    : LPVVRKVEQRIANNSSLNHEYLP--ILGLAEFRTCASRLALGD-DSPALQEKRVGGVQ-SLGGTGALRIGAEFLARWYNGTNNKDTPVYVSS-PTWENHNGVFTTAGFKDIRSYRYW-----DTEKRGLDLQGFLSDL---ENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAY---QGF--ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSI--LRVLSQMQKIVRVTWSNPP---AQGARIVARTLSDPELFHEWTGNVKTMADRI----LSMRSELRARLEALKTPGTW-----NHITDQIGMFSF---TGLNPKQV-EYL-----INQKHIYLLPSG--RINMCGL--TTKNLDYVATSIHEAVTKIQ :
    : HPEIVSVIGEYAGK--LDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE-AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQ---TGV----GRTGTMFACQRDGVTPDI-----LTLSKTLGA-GLPLAAI-VTSAAIEER--AHELGYLFYTTHVS-DPLP---AAVGLRVLDVVQRDGLVARANVMGDRLRRGL----LDLMERFDC-IGDVRGRGLL--LGVEIVKDRRTKEPA---DGLGAKITRECMNLGLSMNIVQLPGMGGVF-RIA-PPLTVSEDEIDLGLSLLGQAIERAL :
    : HPEVIEALKVAMEK---GTSFGA--PCALENVLAEMVNDAVPSIEMVRFVNSGTEACM-AVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKA-GSGVATLGLPSSPGVPKKTTANTL-----TTPYNDLEAVKALFA----ENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVM---TGF-----RIAYGGVQEKFGVTPDL-----TTLGKIIGG-GLPVGAY-GGKREIMQL--VAPAGPMYQAGTLSGNPLA---MTAGIKTLELLRQPGTYEYLDQITKRLSDGL----LAIAQETGHAACGGQVSGMF-----GFFFTEGPVHNY---EDAKKSDLQKFSRFHRGMLEQGIYLAPSQF-EAGFTSLAHTEEDIDATLAAARTVMSAL- :
    : AMSDHQWAAMITGD----EAYAG--SRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVEL--NGCKAINIVTEKAF-DSETYDDW-----KGDFDIKKLKENIAQ----HGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKLDP-LLNIGGL-VAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFL-LGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA :

Iteration

LeveldcaL#cutstime [s]U BoundU /wo cg costcost2
72254 7.5304008439300 3885238852
64126 3.8723934838852 3875238752
5862 2.0493900038752 3867038670
41630 1.2583875038670 3865738638
33214 7.4203863838638 3859938599
2646 31.4863859938599 3851738517
11282 2387.6653851738517 3847338473

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.