Oma results of: 1eft

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Information

Number of sequences	4
Longest sequence	405
Average identity	30

best oma cost	36601
at segment width
time[s]	599.7
mem[pages]	22677
mem[MB](8kb/page)	177

oma version info: (1.0-solaris-gnu=egcs-2.91.66-opt-watch-990610:2033)

Alignment

# AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDI-DKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGV-EMHRKTLQEGIAGDNVGLLLRGVSREEVERGQ-VLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGV----VRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE #
# -----MSQKPHLNLIVIGHVDHGKSTLIGRLL-MEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEEGQTREHIILSKTMGINQVIVAINKMDLADDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVA---PDGDNVTHKSTKM--PWYNGP-TLEELLDQ-LEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVGKIGE---VRSI-ETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGD-VAGSVQNPTVADEFTAQVIVIW-----HPTAVGVGYTPVLHVHTASIACR----VSAEKNPQFIKAGDSAIVKFKPIKELVAEKFRRFAMRDMGKTVGVGVIIDV-- #
# ---DMFGGKDHMSIIFMGHVDAGKSTMGGNLLFLTGAEKYEREAKDAGIM-DTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEGGQSREHAILAKTQGVNKLVVVINKMDDPTSKERYEECTTKLAMYLKGVGYQKGDVLFMPVSG---YTGAGLKERVSQKDAPWYNGP-SLLEYLDS-MPLAVRKINDPFMLPISS--KMKDLGTVIEGKIESGHVKKGQNLLVMPNKTQVE---VTTIYNETEAEADSAFCGEQVRLRLRGIEEEDLSAGY-VLSSINHVKTVTRFEAQIAIVE-----LKSILSTGFSCVMHVHTAIEEVTFTQLLHSKKAPAFAKQGMKIIAVLETTEPVCIESLGRFTLRDQGQTIAIGKVTKLL- #
# -------------IATAGHVDHGKTTLLQA---ITGVNA------------DRLPEEKKRGMTIDLGYAYWPQPGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA-RVDEVERQVKEVLREYGFAEAKL-FITAAT----EGRGMD---------------ALREHLLQ-LPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMR---VRAL-HAQNQPTETANAGQRIALNIAGDAKEQINRGDWLLADV----PPEPFTRVIVELQ-----THTPL-TQWQP-LHIHHAASHVT----GRVS-----LLEDNLAELVFDT--PLWLADNDRLVLRDISARNTLAGARVV-- #

Iteration

Level	dcaL	#cuts	time [s]	U Bound	U /wo cg	cost	cost2
7	2	254	7.330	37330	36962	36732	36732
6	4	126	3.722	36996	36732	36697	36697
5	8	62	2.085	36881	36697	36679	36679
4	16	30	1.246	36767	36679	36656	36652
3	32	14	2.950	36692	36652	36641	36641
2	64	6	2.702	36641	36641	36632	36632
1	128	2	18.651	36632	36632	36622	36622
0	256	0	557.516	36622	36622	36601	36601

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.