Oma results of: 1sesA

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Information

Number of sequences5
Longest sequence442
Average identity33
  
best oma cost67140
at segment width
time[s]2696.0
mem[pages]47493
mem[MB](8kb/page)371

oma version info: (1.0-solaris-gnu=egcs-2.91.66-opt-watch-990610:2033)

Alignment

# MVDLKRLRQE----PEVFHRAIREKG-VALDLEALLALDREVQELKKRLQEVQTERNQVAKRV--PK--APPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVG-GEEANREIKRVG--GPPEFSFPPL-----------DHVALMEKNGWWE-PRISQVSGSRSYALKGDLALYELALLRFAMDFMARR-GFLPMTLPSYAREKAFLGTGHFPATRDQVWA---IAETDLY------LTGTAEVVLNALHSGEIL--PYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEG---------RYRETHSCSALLDWQARRANLRY--R-DPEGRVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVLEPC #
# MLDPNKLRNN----YDFFKKKLLERNNVEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQV------AKQKDNKKLLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGKNSEANLELLKEG--RKPVFDFKPL-----------PHRELCEKLNLVFADKATKISGTRFVAYTDKAAKLLRAITNLMIDLNKSK--YQEWNLPVVINELSLRSTGQLPKFKDDVFK---LENTRYY------LSPTLEVQLINLHANEIF--NEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTELVKFCKP--ENAINELEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASN---------EYREVSSCSSCGDFQARRAMIRY--KDNINGKNSYVATLNGTALSIDRIFAAILENFQTKDGKILIPQALKKYLDFDTIK-- #
# MLDINQFIEDKGGNPELIQSRQKARNASVEIVDEIISDYKDWVTRFKELDELNKKFNKLQKDIGLKK--NFKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVS-NDEENNELVRTW--KPEDLEAVPIASVTGKPASLGSHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAK-GYIPLQAPVMMNKELMSKTAQLSEFDEELYK-IDVGEDEKY------LIATSEQPISAYHSGEWFKPEQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQK---------EYKELVSCSNCTDYQSRNLEIRCGIKMGKDREKKYVHCLNSTLAATQRALCCILENYQTEDG-LVVPEVLRKYIPGE----- #
# MLSRQFVREH----PETVRDAIERKGVTGVDLDEILDIDEEWRELKAEGDGLRQERNEVSSKIGELKQDGKDEEAQEAIDRSQELKDELQDIEERADELESQLEEALLELPNIPHESVPTGEGEADNVERYREGFDDLRDLPDEVV-----------PHYDLGEDLDLLDFERGAKVSGGGYQFVKGEGARLEHALIQFMLDVHREQ-EYVDVLPPIPVNSDSMEGTGQLPKFAEDAYR-VGARQDDDYDSDDLWLLPTAEVPVTNMYRGEIL--LDDDLPVKHQAFSPNFRREAGEHGTETRGYVRVHQFHKVELVNFVRP--ENSYDRLESLLDEAAEVLDRLELPYRVLDMCTGDMGFTQAKKYDIEVWAPGDDMEDGPDRGGRWLEVSSVSNFEDFQARRAGLRY--RPERHESADYLHTLNGSGLAVPRVLVAIMEYYQNDDGTITVPEPLRPYMGGQEV--- #
# MIDPNLLRNN----LAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAK--ARGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWG--TPRTFDFEVK-----------DHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYA-----LIPTAEVPVTNLVRDVII--DEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDP--DKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQN---------TYREISSCSNMWDFQARRMQARC--KAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMG------- #

Iteration

LeveldcaL#cutstime [s]U BoundU /wo cg costcost2
72254 7.4346786767403 6730567305
64126 3.4086743367305 6729467294
5862 1.9426735867294 6723167231
41630 1.4576726367231 6717267154
33214 1.5386721867154 6715367153
2646 3.5316715367153 6715367153
11282 31.7976715367153 6715067150
02560 2640.4206715067150 6714067140

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.