Oma results of: glg

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Information

Number of sequences5
Longest sequence486
Average identity31
  
best oma cost74383
at segment width
time[s]?
mem[pages]0
mem[MB](8kb/page)0

oma version info: (1.0-solaris-gnu=egcs-2.91.66-opt-watch-990610:2033)

Alignment

    : M--SLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDGEI--------LYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETP--RYDNRYRDFKGTP-----PKGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNE------LDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNF-----KIPNFFHVPMILNE-EGQKLSKRHGATN--VMDYQEMGYLKEALVNFLARLGWSYQ------DKEVFSMQELLELFDPKDLNSSPSCFSWHKLNWLNAHYL--KNQSVQELLKLLKPFSFSDLSH--LNPTQLDRLLDALKERSQTLKELALKIDEV--LIAPVEY--EEKVFKKLNQALVMPLLEKFKLELNKANF-NDESALENAMR-QIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEAL-FILGKTESVKRIE :
    : M--EKIRTRYAPSPTGYLHVGGTRTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQFDNLRWLGVIADESVYNPGNYGPYLQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRKQAINNHKTP--KYLGHCRNLHSKKITNHLEKNDPFTIRLKINNEAEYSWNDLVRGQITIPGSA------LTDIVILKANGVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAIYQALGF----KRIPRFGHLSVIVDE-SGKKLSKRDEKTTQFIEQFKQQGYLPEALLNFLALLGWHPQ-----YNQEFFNLKQLIENFSLSRVVSAPAFFDIKKLQWINANYI--KQLTDNAYFNFIDNYLDVKVDY--LKDKNREISL-LFKNQITHGVQINELIRES--FATKIGVENLAKKSHILFKNIKLFLEQLAK-SLQGLEE-WKAEQIKTTIN-KVGAVFNLKGKQLFMPIRLIFTNKEHGPDLAHII-EIFDKESAINLIK :
    : HPSLPVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETP--------IKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSKLAQGIPFTVRFKSPERYP-TFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGW-----ACPKFIHIPLLTTV-GDKKLSKRKGDMS--ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRINDFHDEFYYFFEKPKYNDNDAVTKFLSKNESRHIAHLLK-KLGQLQEGTDAQEVESMVE-TMYYENGFSRKVTYQAMRFALAGCHPGAKIAAMI-DILGIKESNKRLS :
    : PQAAKVRVRFCPSPTGVPHVGMVRTALFNWAYARHTGGTFVLRIEDTDADRDSEESYLALLDALRWLGLNWDEGPEVGGPYGPYRQSQRTDIYREVVAKLLATGEAYYAFSTPEEVEN-RHLAAGRNPKL--GYDNFDRDLTDAQFSAYLAEGRKPVVRLRMPDEDI-SWDDLVRGTTTFAVGT------VPDYVLTRASGDPLYTLVNPCDDALMKITHVLRGEDLLSSTPRQVALYQALIRIGMAERIPEFGHFPSVLGE-GTKKLSKREPQSN--LFAHRDRGFIPEGLLNYLALLGWAIA-----DDHDLFSLDEMVAAFDVVDVNSNPARFDQKKADAVNAEHI--RMLDSEDFAGRLRDYFTTHGYHIALDPANYEAGFVAAAQLVQTRIVVLGDAWDLLKFLNDDEYSIDSKAAAKELDADAGPVLDVACAVLDSLVD-WTTASIEDVLKVALIEGLGLKPRKVFGPIRVAATGALVSPPLFESL-ELLGRARSLQRLS :
    : M------LRFAPSPTGDMHIGNLRAAIFNYIVAKQQYKPFLIRIEDTDKERNIEGKDQEILEILKLMGISWDKLV--------Y-QSHNIDYHREMAEKLLKENKAFYCYASAEFLEREKEKAKNEKRPF--RYSDEWATLEK-------DKHHAPVVRLKAPNHAV-SFNDAIKKEVKFEPDE------LDSFVLLRQDKSPTYNFACACDDLLYKISLIIRGEDHVSNTPKQILIQQALGS----NDPIVYAHLPIILDEVSGKKMSKRDEASS--VKWLLNQGFLPVAIANYLITIGNKVP-------KEVFSLDEAIEWFSLENLSSSPAHFNLKYLKHLNHEHL--KLLDDDKLLELTS-----------IKDKNLLGLLRLFIEECGTLLELREKI-SL--FLEPKDI-----VKTYENEDFKERCLALFN-ALTSMDF-QAYKDFESFKK-EAMRLSQLKGKDFFKPLRILLTGNSHGVELPLIFPYIQSHHQEVLRLK :

Iteration

LeveldcaL#cutstime [s]U BoundU /wo cg costcost2
82262 8.0497569775201 7464074640
74254 7.3517524074640 7464074640
68126 3.7697488074640 7456674566
51662 2.1757471874566 7444274419
43230 1.5707445174419 7441974419
36414 3.2577441974419 7439774397
21286 193.3177439774397 7439774397
12562 1634.8747439774397 7438374383

Picture of Iteration

Explanation of the key.

Picture of Watches

Explanation of the key.