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Attention:
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passta - Welcome
Passta: Protein annotation by secondary-structure based alignment
Passta helps to decide whether a protein sequence is related to a protein with known structure. Given a protein query, Passta tries to "explain" it with secondary structure elements (SSEs) from related SCOP protein domains. The approach is able to handle rearrangements and duplications, and it displays the results in an integrated fashion.
Query: Protein sequence
Output: Passta alignment with associated SSE information
Research assisted by Passta should cite:
Protein Annotation by Secondary Structure Based Alignments (Passta)
C. Bannert, J. Stoye
LNBI, volume 3695, pp. 79-90, 2005
Protein Annotation by Secondary Structure Based Alignments (Passta)
C. Bannert, J. Stoye
LNBI, volume 3695, pp. 79-90, 2005
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