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Reputer - Welcome
Fast Computation
of Degenerative Repeats in Complete Genomes
WWW Version
The REPuter program family provides state of the art
software solutions to compute and visualize repeats in whole
genomes or chromosomes.
The website provides a partly limited online version of
REPuter. The uploaded data size is hard limited to 5 Mb
and a maximum of 5000 repeats is calculated due our server
capacity. There is a standalone version of REPuter available for
Linux, OSX, Solaris, Irix and Alpha. If you are interested to
obtain a standalone version, please download the license agreement and follow the
instructions.
Since March 2005 we offer REPuter as WebService, see our
WebService page for more
information.
If you use REPuter (as standalone or via BiBiServ) for your
research please cite the following paper: S. Kurtz, J. V. Choudhuri, E. Ohlebusch,
C. Schleiermacher, J. Stoye, R.
Giegerich: REPuter:
The Manifold Applications of Repeat Analysis on a Genomic
Scale. Nucleic Acids Res., 29(22):4633-4642, 2001.