Thursday, July 8 (W9-108*)
|
| 10:00 | Hervé Isambert: "Kinefold server: online RNA folding stochastic simulations including pseudoknots" |
| 10:45 | Irmtraud Meyer: "Co-transcriptional folding is encoded within RNA genes" |
| 11:30 | Robert Giegerich: "More Fun in Dynamic Programming with Pair Algebras" |
| 12:15 | Lunch Break |
| 13:30 | Björn Voss: "RNA folding based on abstract shapes" |
| 14:15 | Franz Narberhaus: "RNA thermometers: From molecular biology to bioinformatics" |
| 15:00 | Coffee Break |
| 15:15 | Gerhard Steger: "Viroids: minimal plant pathogens. Views from Biophysics and Bioinformatics" |
| 16:00 | Jörg Vogel: "Novel regulatory noncoding RNAs in bacteria" |
| 16:45 | Coffee Break |
| 17:00 | Marc Rehmsmeier: "Fast and effective prediction of microRNA/target duplexes" |
| 17:45 | Gregor Obernosterer: "Evaluation of microRNA Folding Energies" |
| 18:00 | Gerhard Steger: "Are local changes in thermodynamic stability of genomic sequences correlated with gene expression?" |
In the evening: Dinner at the Café Bernstein | |
Friday, July 9 (W9-108*)
|
| 9:00 | Andreas Wilm: "Construction of Consensus Structures == ConStruct" |
| 9:45 | Paul Gardner: "An (almost) comprehensive comparison of comparative RNA folding algorithms" |
| 10:30 | Coffee Break |
| 10:45 | Matthias Höchsmann: "Pure Multiple Structure Alignment - A Progressive Profile Approach" |
| 11:30 | Ivo Hofacker: "How to Recognize ncRNAs from Quite a Long Way" |
| 12:15 | Lunch Break |
| 13:30 | Robert Giegerich: "Ambiguity Matters" |
| 14:00 | Janina Reeder / Thomas Höchsmann: "A visual RNA editor for generating thermodynamic matchers" |
| 14:45 | Coffee Break |
| 15:00 | Michael Woodhams: "Scanning genomes for RNase MRP" |
| 15:45 | Christoph Flamm: "Sequence design & cofold" |
Welcome