> 5S rRNa from Dynalign publication ( Mathews & Turner, JMB, 2002)
> sequences and structures from 5SRNADB ( http://rose.man.poznan.pl/5SData/)

>Haloferax volcanii
UUAAGGCGGCCAGAGCGGUGAGGUUCCACCCGUACCCAUCCCGAACACGGAAGUUAAGCUCACCUGCGUUCUGGUCAGUACUGGAGUGAGCGAUCCUCUGGGAAAUCCAGUUCGCCGCCCCU
....((((((....(((((((......((((((.............))))..)).....))))).))...((((......((((((.((....)))))))).....))))...))))))...
> Arthrob.globiformis 
AUUACGGCGGUCAUAGCGUGGGGGAAACGCCCGGUCCCAUUCCGAACCCGGAAGCUAAGACCCACAGCGCCGAUGGUACUGCACCCGGGAGGGUGUGGGAGAGUAGGUCACCGCCGGACAC
.((.(((((((....(((((((......((((((.............))))..)).....))))).)).((.......((((((((....)))))))).......))..)))))))))...
>LT50091 Mycobacterium phlei  
GUUACGGCGGUCAAUAGCGGCAGGGAAACGCCCGGUCCCAUCCCGAACCCGGAAGCUAAGCCUGCCAGCGCCAAUGAUACUACCCUUCCGGGUGGAAAAGUAGGACACCGCCGAACAu
(((.(((((((.....(((((((......((((((.............))))..)).....))))).)).((.......((((((....)))))).......))..))))))))))..
>Lactobacillus plantarum(Firmicutes,Clostridiobacteria)
UGUGGUGACGAUGGCGAGAAGGAUACACCUGUUCCCAUGUCGAACACAGAAGUUAAGCUUCUUAGCGCCGAGAGUAGUUGGGGGAUCGCUCCCUGCGAGGGUAGGACGUUGCCAUGC
(((((((((....(((((((......((((((.............))))..)).....))))).)).((.......((.(((((....))))).)).......))..))))))))).
> Porphyromonas gingivalis(Cytophagales)
CUCAGGUGGUUAUUACGUUGGGGAUCCACCUCUUCCCAUUCCGAACAGAGAAGUUAAGCCCAACGGUGCCGAUGGUACUGCGUUAUAGUGGGAGAGUAGGACGCCGCCGCC
....((((((....(((((((......((((((.............))))..)).....))))).)).((.......((((......)))).......))..))))))...