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                                    Bielefeld         University Bioinformatic Service
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RNAhybrid - Submission

Please submit at least one target-sequence!
Copy/paste here the sequence(s) of your target RNA (in FASTA format)
or upload :
Please submit at least one MicroRNA-sequence!
Copy/paste here the sequence(s) of your micro RNA (in FASTA format)
or upload
Hits per target (-b)
Energy cut-off(-e)
Helix constraint (-f)
 to 
No G:U in seed (-G)
Window length (-C)6
Max internal loop size (-u)
Max bulge loop size (-v)
Compact output (-c) for an approximate estimate of p-values select the source of target sequences
Note:
  1. The maximum size of all uploaded data is limited to 1 MB. The maximum sequence size is limited to 50 KB (for each target RNA) and 150 B (for each micro RNA).
  2. The output is restricted to at most 100 hits per miRNA/target pair.
  3. The Example button insert sample sequences in the form above (JavaScript is needed).
  4. If sequences are submitted, the connection will be terminated after 5 minutes. This means that only relatively small data sets can be calculated.
  5. For efficiency reasons, this version does not support the statistical analysis described in the publication. The full version, however, can be downloaded and installed locally.
  6. for seed-match speed-up
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Wed Feb 12 09:51:51 2014