This is the root element for rnastructAlignmentML. Represents a unsorted list of structure alignments. represents a rna structure alignment Synonyms for this element inherit gappedFreeSequenceType from hobitTypes; does not allow gaps An aligned nucleic acid sequence. Defines a list of structure probabilities, which is a triplet of two positions and and a probality. Defines a new type for structure probabilty. A structure probabilty is defined by two bases and a pairing probability between them. Position of the first base. Position of the second base. Probability of the base pair.